Department of Pharmaceutical Chemistry 


BIOTECHNOLOGY INDUSTRIAL INTERNSHIPS
 
To ensure that trainees experience the process and the problems associated with the development of biotechnology products, each trainee is required to complete an internship in a pharmaceutical or biotechnology company.  Trainees are expected to fulfill this internship requirement any time after their 2nd year as a graduate student at The University of Kansas.  The site for the trainee's internship and the duration of the internship will be decided in consultation with the trainer and the Steering Committee.

Potential industrial internship sites include Abbott Laboratories, Abbott Park, IL; Alkermes, Inc., Cambridge, MA; Alza Corp., Palo Alto, CA; Amgen, Thousand Oaks, CA; Aradigm,  San Francisco, CA; Boehringer-Ingelheim, Ridgefield, CT; Bristol-Myers Squibb, New Brunswick, NJ; DuPont Merck Pharmaceutical Co., Wilmington, DE; Gene Medicine, Woodland, TX; Genentech, Inc., South San Francisco, CA; Gilead Sciences, Foster City, CA; Glaxo Wellcome, Research Triangle Park, NC; Hoechst Marion Roussel, Kansas City, MO; Hoffmann-LaRoche, Inc., Nutley, NJ; Inhale, Palo Alto, CA; R.W. Johnson Pharm. Res. Inst., Spring House, PA; Lilly Research Laboratories, Indianapolis, IN; MegabiosCorp., Burlingame, CA; Merck Sharp & Dohme Research Laboratories, West Point, PA; Parke-Davis Pharmaceutical Research, Ann Arbor, MI; Pharmacia & Upjohn, Kalamazoo, MI: The Procter & Gamble Co., Cincinnati, OH; RhonePoulenc Rorer, Collegeville, PA; Scios Nova, Inc., Mountain View, CA; Searle, Skokie, IL; SmithKline Beecham Pharmaceuticals, Collegeville, PA; and Zeneca Pharmaceuticals, Macclesfield, England and Wilmington, DE.  Every effort will be made to select an internship environment which will complement the trainee's research interests and his/her career goals and objectives.
 

BIOTECHNOLOGY SEMINAR SERIES

To ensure communication between the trainees and the trainers in The University of Kansas Biotechnology Predoctoral Training Program and exposure of this training program to the external scientific community, the Steering Committee sponsors and coordinates a monthly seminar series entitled, "Pharmaceutical Aspects of Biotechnology."  Participation is open to the public and presentations will be given by faculty and students at The University of Kansas and by external industrial and academic scientists involved in biotechnology research related to the objectives of this training program.
 

RESEARCH COMPONENT

Trainees in this program are selected based in part on the relevance of their Ph.D. dissertation research to the objectives of this training program.  The research of all of the trainees is of a basic nature and focuses on problems relevant to the analysis, delivery and formulation of materials (e.g., peptides, proteins, nucleic acids) arising from biotechnology.  By focusing on basic research projects, the trainees learn: (1) how to ask important, concept-oriented questions; (2) how to design appropriate experiments to test the concepts and control for artifacts; and (3) how to analyze the resulting data.  The trainees are exposed to more applied research problems related to the analysis, delivery, and formulation of biotechnology products through their industrial internship.  Examples of dissertation projects are provided in Table 2 below.
 

FACILITIES

The University of Kansas research laboratories are equipped with state-of-the-art instrumentation.  Equipment is available to support all aspects fo chemical, biochemical, engineering or computational research.  Specialized laboratories available to faculty and students include: The Nuclear Magnetic Resonance Laboratory; The Mass Spectrometry Laboratory; The Molecular Modeling Research and Molecular Graphics and Modeling Laboratories; The Electron Microscopy Laboratory; The X-Ray Crystallographic Laboratory; The Instrumentation Design Laboratory; and The Biochemical Research Service Laboratories.
 


Table 2

Examples of Research Projects Available to Trainees Participating in the Predoctoral Training Program in Biotechnology

Mentor

Collaborator(s)

Type of  Project

Title

Jeffrey Aube 

Ronald T. Borchardt 
Kenneth L. Audus 
John F. Stobaugh 
David G. VanderVelde

Delivery 

Absorption Properties of Peptide Peptidomimetics 
 
 
 

Kenneth L. Audus 

John F. Stobaugh 
Elias Michaelis 
Gary Grunewald

Delivery 

Carrier-Mediated Peptide Transport by Brain Microvessel Endothelium 

Ronald T. Borchardt

Jeffrey Aube 
David G. VanderVelde 
Ralph Hirschmann and Amos R. Smith (University of Pennsyylvania) 
Kristina Luthman (University of Tromso, 
Norway

Delivery

Transport Characteristics of Peptide Mimetics

Ronald T. Borchardt

Teruna J. Siahaan 
John F. Stobaugh 
David G. VanderVelde 
Binghe Wang (North Carolina State Univ.) 
Frank Porreca (University of Arizona)

Delivery

Cyclic Prodrugs of Opioid Peptides

Robert C. Dunn

None

Delivery

Development of Near-Field Fiber Optic 
Biosensors to Monitor Ion Flux Through 
SingleVoltage-Gated Protein Channels

Krzysztof Kuczera

Richard L. Schowen

Formulation

Molecular Modeling of Protein Degradation

Brian B. Laird

Walter Kob (Univ. of  Mainz, Germany)

Formulation

Localization in Glasses and Supercooled Liquids: Theory and Computer Simulation

Cynthia K. Larive

None

Analytical

Development of NMR Methods for the Analysis of Self-Aggregation Equilibria of Peptides and Proteins

Craig E. Lunte

Susan M. Lunte 
John F. Stobaugh

Analytical

Sampling and Detection of Pharmacologically  and Biochemically Active Peptides

Susan M. Lunte

Bret Berner (Cygnus Pharmaceuticals) 
Al Ewing (Cygnus Pharmaceuticals)

Analytical

Glycoprotein Characterization by Capillary Electrophoresis with Electrochemical Detection

Susan M. Lunte

Kenneth L. Audus 
Craig Lunte

Analytical

Microanalytical Methods for the Study of the Transport and Metabolism of PeptidesAcross the Blood-Brain Barrier

C. Russell Middaugh

Thomas C. Squier 
Diane Bigelow

Delivery

Phospholamban Structure and Function

C. Russell Middaugh

D. Volkin (Merck)

Delivery

Atypical Protein Membrane Transport

C. Russell Middaugh

R. Pearlman (Megabios)

Delivery

Construction of Nonviral Gene Delivery Vectors

C. Russell Middaugh

None

Delivery

Mechanism of the Membrane Transport of Plasmid and Plasmid Complexes

C. Russell Middaugh

None

Analytical 

Analysis of Plasmid-Based Pharmaceuticals

Mark L.Richter

Richard L. Schowen 
Kenneth L. Audus 
Diane Bigelow 
Peter Gegenheimer

Formulation

Refolding of ATP Synthase Subunits from E. coli  Inclusion Bodies

Christian Schoneich

George S. Wilson 
Todd D. Williams 
Gordon L. Hug (Univ. Notre Dame) 
Krzysztof Bobrowski (Inst. Nuclear Chem. and Technol., Warsaw, Poland) 
Susan Hershenson (Amgen) 
Suzanne Thompson (Amgen) 
Jeffrey Cleland (Genentech) 
Michael J. Hageman (Pharmacia & Upjohn, Inc.) 
Sunanda Naranayan (Hoechst Marion Roussel)

Formulation

Mechanisms of Protein and Peptide Oxidation by Reactive Oxygen Species

Richard L. Schowen

Ronald T. Borchardt 
Elizabeth M. Topp 
David G. VanderVelde 
Brian B. Laird 
Michael J. Hageman  (Pharmacia & Upjohn, Inc.)

Formulation

Kinetics adn Mechanisms of Hydrolysis of a Hexapeptide-DerivedCyclic Imide in Polymer Matrices

Richard L. Schowen

Ronald T. Borchardt 
Elizabeth M. Topp 
David G. VanderVelde 
Brian B. Laird 
Michael J. Hageman (Pharmacia & Upjohn, Inc.)

Formulation

Formation and Decomposition of Cyclic Intermediates in Peptide Deamidation

Teruna J. Siahaan

Kenneth L. Audus

Delivery

Modulation of Intercellular Junctions by HAV Peptides

Teruna J. Siahaan

Ronald T. Borchardt 
Krzysztof Kuczera

Delivery

Improving Oral Bioavailability of RGD-Peptidomimetics

Teruna J. Siahaan

Paul Stoker 
Krzysztof Kuczera

Analysis/ 
Formulation

Conformation and Stability Studies of Linear and Cyclic RGD-Peptides

Teruna J. Siahaan

Stephen H. Benedict 
Marcia Chan 
Krzysztof Kuczera

Analysis/ 
Formulation

Conformation, Stability and Mechanisms of Action of Immunosuppressive Peptides Derived from ICAM-1 and LFA-1

Marylee Z. Southard

John Gauch 
Brad Olney (KU Medical Center)

Analytical

Visualization of Cellular Stress Responses in Flow Culture

Thomas C. Squier

None

Formulation

Molecular Mechanisms Underlying Liposome Stability

Thomas C. Squier

Christian Schoneich

Formulation

Stability of Oxidatively Modified Proteins

Thomas C. Squier 
Christian Schoneich

None

Formulation/ 
Analytical

Changes in Protein Structure and Dynamics Induced by Oxidation of Methionine Sulfoxide as Examined by Fluorescence Spectroscopy

Valentino J. Stella

Elizabeth M. Topp 
William N. Charman 
Susan Charman

Formulation/ 
Targeting

Coupling of Immune Modulators and Anticancer Drugs to Hyaluronic Acid for Targeted Drug Delivery to the Lymphatics

John F. Stobaugh

Susan M. Lunte

Analytical

Developmentof Micro-Solid-Phase Derivatization Characteristics for the Analysis of Peptides

Bala Subramaniam

Valentino J. Stella

Formuation

Micronization of Biotechnology Products with Supercritical Carbon Dioxide

Elizabeth M. Topp

Ronald T. Borchardt 
Richard L. Schowen 
David G. VanderVelde 
Brian B. Laird 
Michael J. Hageman (Pharmacia & Upjohn, Inc.)

Formulation

Role of Mobility in the Polymer in Peptide Deamidation in Polymer Matrices

Elizabeth M. Topp

Ronald T. Borchardt 
Richard L. Schowen 
David G. VanderVelde 
Brian B. Laird 
Michael J. Hageman (Pharmacia & Upjohn, Inc.)

Formulation

Effect of Water/Polymer Interactions on Peptide Deamidation in Polymer Matrices

George S. Wilson

Todd Williams 
David G. VanderVelde 
Rob Anderegg (Glaxo Wellcome)

Analytical

Conformational Recognition of Proteins by Immunoassay

 
 


Updated 1/6/98.